clang-tidy: Fix all remaining misc-include-cleaner violations

- Remove unused includes
- Add common false positive headers to misc-include-cleaner.IgnoreHeaders
- Add IWYU pragma keep for uncommon false positive headers

src/basic/architecture.h

@@ -1,7 +1,7 @@
 /* SPDX-License-Identifier: LGPL-2.1-or-later */
 #pragma once
 
-#include <endian.h>     /* IWYU pragma: keep */
+#include <endian.h>
 
 #include "basic-forward.h"